Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | B5F00_02620 | Not Available | Positive | 640863 - 643949 | 114155.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_02625 | Not Available | Positive | 643965 - 645515 | 58666.8 |
| collagenase-like protease | B5F00_02630 | Not Available | Negative | 645641 - 646927 | 47924.8 |
| trna dihydrouridine synthase dusb | B5F00_02635 | Not Available | Positive | 647078 - 648067 | 37213.5 |
| duf2807 domain-containing protein | B5F00_02640 | Not Available | Negative | 648163 - 649014 | 29141.2 |
| hypothetical protein | B5F00_02645 | Not Available | Negative | 649191 - 650168 | 37776.6 |
| nad-dependent dehydratase | B5F00_02650 | Not Available | Negative | 650159 - 651205 | 40230.5 |
| cation-efflux pump | B5F00_02655 | Not Available | Negative | 651216 - 652157 | 34492.5 |
| ribonuclease r | B5F00_02660 | Not Available | Positive | 652249 - 654396 | 82055.5 |
| serine acetyltransferase | B5F00_02665 | Not Available | Positive | 654697 - 655605 | 32826.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

