Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_22140 | Not Available | Positive | 5308605 - 5309312 | 27958.9 |
| hypothetical protein | B5F00_22145 | Not Available | Positive | 5309334 - 5309975 | 24646.1 |
| susd family outer membrane lipoprotein nanu | B5F00_22150 | Not Available | Negative | 5310076 - 5311665 | 60057.3 |
| susc/raga family tonb-linked outer membrane protein | B5F00_22155 | Not Available | Negative | 5311681 - 5315001 | 122804.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_22160 | Not Available | Negative | 5315443 - 5317428 | 74157.0 |
| susc/raga family tonb-linked outer membrane protein | B5F00_22165 | Not Available | Negative | 5317444 - 5320644 | 118397.0 |
| virulence-associated protein e | B5F00_22170 | Not Available | Negative | 5321133 - 5322284 | 45247.5 |
| hypothetical protein | B5F00_22175 | Not Available | Negative | 5322389 - 5322595 | 7990.83 |
| dna-binding protein | B5F00_22180 | Not Available | Positive | 5322597 - 5323235 | 24262.8 |
| glpgli family protein | B5F00_22185 | Not Available | Positive | 5323314 - 5325020 | 63882.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

