Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | B5F00_21870 | Not Available | Negative | 5228513 - 5230582 | 78036.5 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21875 | Not Available | Negative | 5230614 - 5232149 | 58961.3 |
| susc/raga family tonb-linked outer membrane protein | B5F00_21880 | Not Available | Negative | 5232170 - 5235586 | 126301.0 |
| anti-sigma factor | B5F00_21885 | Not Available | Negative | 5235732 - 5236718 | 38489.2 |
| rna polymerase subunit sigma-70 | B5F00_21890 | Not Available | Negative | 5236849 - 5237430 | 22743.6 |
| glycosyl transferase family 2 | B5F00_21895 | Not Available | Negative | 5237470 - 5239104 | 62073.9 |
| transporter | B5F00_21900 | Not Available | Negative | 5239216 - 5240886 | 60143.8 |
| methylmalonyl-coa mutase small subunit | B5F00_21905 | Not Available | Positive | 5241173 - 5243083 | 70672.7 |
| methylmalonyl-coa mutase | B5F00_21910 | Not Available | Positive | 5243093 - 5245243 | 79110.7 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21915 | Not Available | Negative | 5245568 - 5247058 | 55950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

