Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | B5F00_21820 | Not Available | Negative | 5213104 - 5214099 | 39135.4 |
| abc transporter atp-binding protein | B5F00_21825 | Not Available | Negative | 5214121 - 5214942 | 31124.6 |
| eama family transporter | B5F00_21830 | Not Available | Positive | 5215025 - 5215951 | 33097.5 |
| oxidoreductase | B5F00_21835 | Not Available | Negative | 5216060 - 5216920 | 31866.1 |
| nadh:flavin oxidoreductase | B5F00_21840 | Not Available | Negative | 5216917 - 5218140 | 45490.3 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase | B5F00_21845 | Not Available | Negative | 5218203 - 5218967 | 29542.7 |
| hypothetical protein | B5F00_21850 | Not Available | Negative | 5219498 - 5219686 | 7150.47 |
| susc/raga family tonb-linked outer membrane protein | B5F00_21855 | Not Available | Positive | 5220121 - 5223213 | 115018.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21860 | Not Available | Positive | 5223226 - 5225043 | 68298.9 |
| beta-galactosidase | B5F00_21865 | Not Available | Negative | 5225227 - 5228457 | 122662.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

