Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21770 | Not Available | Positive | 5202320 - 5203810 | 55729.7 |
| thiol reductase thioredoxin | B5F00_21775 | Not Available | Positive | 5203829 - 5204995 | 44514.2 |
| thiol-disulfide oxidoreductase | B5F00_21780 | Not Available | Positive | 5204997 - 5206346 | 50458.3 |
| glutaconyl-coa decarboxylase subunit beta | B5F00_21785 | Not Available | Negative | 5206544 - 5207779 | 44269.9 |
| oxaloacetate decarboxylase | B5F00_21790 | Not Available | Negative | 5207779 - 5209641 | 68972.7 |
| oxaloacetate decarboxylase | B5F00_21795 | Not Available | Negative | 5209672 - 5209923 | 8695.18 |
| nitroreductase | B5F00_21800 | Not Available | Negative | 5210192 - 5210692 | 18979.8 |
| phosphoglycolate phosphatase | B5F00_21805 | Not Available | Positive | 5210755 - 5211408 | 24337.2 |
| 6-phosphofructokinase | B5F00_21810 | Not Available | Negative | 5211418 - 5212398 | 35283.2 |
| doxx family protein | B5F00_21815 | Not Available | Positive | 5212658 - 5213098 | 16170.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

