Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_01915 | Not Available | Negative | 452154 - 452633 | 17978.4 |
| hypothetical protein | B5F00_01925 | Not Available | Positive | 453641 - 453829 | 7393.01 |
| methionine--trna ligase | B5F00_01930 | Not Available | Positive | 453960 - 456002 | 77813.0 |
| lipopolysaccharide biosynthesis protein | B5F00_01935 | Not Available | Positive | 456084 - 457520 | 53494.3 |
| transporter | B5F00_01940 | Not Available | Positive | 457520 - 458545 | 39456.2 |
| glycosyl transferase | B5F00_01945 | Not Available | Negative | 458568 - 459398 | 31885.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | B5F00_01950 | Not Available | Positive | 459490 - 460857 | 50844.2 |
| licd family protein | B5F00_01955 | Not Available | Positive | 460854 - 461669 | 31469.0 |
| hemolysin activation protein | B5F00_01960 | Not Available | Positive | 461666 - 462682 | 40526.7 |
| glycosyl transferase | B5F00_01965 | Not Available | Positive | 462655 - 463770 | 42777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

