Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | B5F00_21505 | Not Available | Negative | 5128117 - 5130951 | 108292.0 |
| beta-galactosidase | B5F00_21520 | Not Available | Positive | 5135447 - 5137885 | 92793.8 |
| susc/raga family tonb-linked outer membrane protein | B5F00_21525 | Not Available | Positive | 5137919 - 5140972 | 114210.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21530 | Not Available | Positive | 5140987 - 5142768 | 68801.7 |
| protease | B5F00_21535 | Not Available | Negative | 5142831 - 5146055 | 120913.0 |
| rna polymerase subunit sigma-70 | B5F00_21540 | Not Available | Positive | 5146234 - 5146821 | 22777.2 |
| hypothetical protein | B5F00_21545 | Not Available | Positive | 5146910 - 5147920 | 38678.5 |
| susc/raga family tonb-linked outer membrane protein | B5F00_21550 | Not Available | Positive | 5147985 - 5151512 | 131521.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_21555 | Not Available | Positive | 5151534 - 5153456 | 73144.0 |
| sulfatase | B5F00_21560 | Not Available | Positive | 5153551 - 5154972 | 52951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

