Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | B5F00_20990 | Not Available | Positive | 5013910 - 5014200 | 11001.3 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | B5F00_20995 | Not Available | Negative | 5015115 - 5016305 | 43888.6 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | B5F00_21000 | Not Available | Negative | 5016355 - 5017773 | 53304.1 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | B5F00_21005 | Not Available | Negative | 5017786 - 5018823 | 39068.1 |
| hydrogenase | B5F00_21010 | Not Available | Negative | 5019023 - 5020486 | 54112.2 |
| co-chaperone groes | B5F00_21015 | Not Available | Positive | 5020867 - 5021139 | 9740.92 |
| molecular chaperone groel | B5F00_21020 | Not Available | Positive | 5021181 - 5022818 | 58147.1 |
| Trna-thr | Not Available | Not Available | Positive | 5023057 - 5023130 | Not Available |
| mate family efflux transporter | B5F00_21030 | Not Available | Positive | 5023282 - 5024634 | 49518.4 |
| camp-binding protein | B5F00_21035 | Not Available | Positive | 5024670 - 5025254 | 22252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

