Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_20475 | Not Available | Positive | 4885070 - 4885273 | 7561.55 |
| radical sam/spasm domain-containing protein | B5F00_20480 | Not Available | Positive | 4885251 - 4886762 | 58108.2 |
| peptidase c39 | B5F00_20485 | Not Available | Positive | 4886755 - 4887336 | 23420.5 |
| hypothetical protein | B5F00_20495 | Not Available | Positive | 4888229 - 4888450 | 8432.03 |
| hypothetical protein | B5F00_20500 | Not Available | Positive | 4888447 - 4888668 | 8490.37 |
| rna degradosome polyphosphate kinase | B5F00_20505 | Not Available | Negative | 4888694 - 4890748 | 80488.6 |
| yfce family phosphodiesterase | B5F00_20510 | Not Available | Positive | 4890806 - 4891303 | 18707.5 |
| dtdp-glucose 4,6-dehydratase | B5F00_20515 | Not Available | Positive | 4891352 - 4892491 | 43722.0 |
| gamma-carboxymuconolactone decarboxylase | B5F00_20520 | Not Available | Positive | 4892666 - 4893228 | 20200.6 |
| hypothetical protein | B5F00_20525 | Not Available | Negative | 4893220 - 4893417 | 7167.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

