Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | B5F00_20365 | Not Available | Negative | 4859970 - 4860173 | 7853.48 |
| exodeoxyribonuclease vii large subunit | B5F00_20370 | Not Available | Negative | 4860182 - 4861489 | 49507.7 |
| serine protease | B5F00_20375 | Not Available | Negative | 4861489 - 4862862 | 50001.9 |
| mate family efflux transporter | B5F00_20380 | Not Available | Positive | 4862983 - 4864353 | 49543.2 |
| cytidylate kinase | B5F00_20385 | Not Available | Positive | 4864407 - 4865036 | 23564.2 |
| hypothetical protein | B5F00_20390 | Not Available | Positive | 4865268 - 4867124 | 72974.4 |
| hypothetical protein | B5F00_20395 | Not Available | Positive | 4867279 - 4867683 | 14819.9 |
| hypothetical protein | B5F00_20400 | Not Available | Positive | 4867827 - 4868759 | 35915.8 |
| peptidase c39 | B5F00_20405 | Not Available | Positive | 4868874 - 4869461 | 23231.6 |
| collagen-binding protein | B5F00_20415 | Not Available | Negative | 4871817 - 4874126 | 87754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

