Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | B5F00_20105 | Not Available | Positive | 4791410 - 4791976 | 22678.5 |
| anti-sigma factor | B5F00_20110 | Not Available | Positive | 4792049 - 4793128 | 41318.0 |
| susc/raga family tonb-linked outer membrane protein | B5F00_20115 | Not Available | Positive | 4793186 - 4796680 | 130452.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_20120 | Not Available | Positive | 4796699 - 4798090 | 53195.6 |
| thiol-disulfide oxidoreductase | B5F00_20125 | Not Available | Positive | 4798102 - 4799478 | 51171.3 |
| thiol-disulfide oxidoreductase | B5F00_20130 | Not Available | Positive | 4799486 - 4800664 | 44760.1 |
| beta-galactosidase | B5F00_20135 | Not Available | Positive | 4801282 - 4803096 | 69300.3 |
| galactose-1-epimerase | B5F00_20140 | Not Available | Positive | 4803102 - 4804235 | 42434.2 |
| hybrid sensor histidine kinase/response regulator | B5F00_20145 | Not Available | Positive | 4804416 - 4808366 | 152238.0 |
| hypothetical protein | B5F00_20155 | Not Available | Positive | 4809252 - 4809569 | 11992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

