Phocaeicola dorei strain An16

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei strain An16 is a Gram-negative, anaerobic, non-motile rod-shaped bacterium classified as a chemoheterotroph. This organism thrives in multiple habitats and has an optimal growth temperature of 37°C, placing it within the mesophilic temperature range. Notably, Phocaeicola dorei strain An16 does not form spores and possesses a single replicon. The absence of mobility suggests that this strain relies on passive means for dispersion within its environment, potentially influenced by the physical and chemical properties of its habitat. The presence of flagella indicates that while the organism itself may not be motile, it may have the capability for movement in a broader context, possibly affecting its interactions with other microorganisms or its environment. Understanding the ecological role of Phocaeicola dorei strain An16 could provide insights into its function within various ecosystems. As a chemoheterotroph, it likely plays a role in nutrient cycling, breaking down organic materials and contributing to the overall microbial diversity and biochemical processes within its habitats. Its anaerobic nature suggests involvement in environments lacking oxygen, such as the intestines of animals or other anoxic niches, where it may interact with other anaerobic bacteria. These traits underline the significance of Phocaeicola dorei strain An16 in microbiological studies and its potential implications in health and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
Strainstrain An16

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei strain An16
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei strain An16 An16_contig_43, whole genome shotgun

Gene Summary

Adenine Count

1588569 bp

Thymine Count

1538368 bp

Guanine Count

1082565 bp

Cytosine Count

1161857 bp

Genome Length

5371359 bp

Protein-coding Genes

4239 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
neuraminidaseB5F00_18540Not AvailableNegative4472146 - 447342049207.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseB5F00_18545Not AvailableNegative4473884 - 447518248271.1
dihydropteroate synthaseB5F00_18550Not AvailablePositive4475301 - 447615831983.9
tigr00159 family proteinB5F00_18555Not AvailablePositive4476190 - 447695428478.5
gnat family n-acetyltransferaseB5F00_18560Not AvailableNegative4477032 - 447804239002.1
hypothetical proteinB5F00_18565Not AvailableNegative4478026 - 447892834455.5
cidb/lrgb family autolysis modulatorB5F00_18570Not AvailableNegative4479152 - 447984724452.1
cida/lrga family proteinB5F00_18575Not AvailableNegative4479828 - 448018113036.8
phosphate acetyltransferaseB5F00_18580Not AvailablePositive4480384 - 448139735550.5
acetate kinaseB5F00_18585Not AvailablePositive4481420 - 448261642823.0

Displaying genes 3611 – 3620 of 4337 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.