Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1 family protein | B5F00_18335 | Not Available | Negative | 4399387 - 4399938 | 19240.6 |
| energy transducer tonb | B5F00_18340 | Not Available | Negative | 4399942 - 4400835 | 31712.9 |
| biopolymer transporter exbd | B5F00_18345 | Not Available | Negative | 4400845 - 4401264 | 16051.8 |
| biopolymer transporter exbb | B5F00_18350 | Not Available | Negative | 4401271 - 4401987 | 25772.9 |
| pyridoxine 5'-phosphate synthase | B5F00_18355 | Not Available | Negative | 4401984 - 4402700 | 26387.6 |
| nad kinase | B5F00_18360 | Not Available | Positive | 4402819 - 4403691 | 32170.4 |
| lipid a 3-o-deacylase | B5F00_18365 | Not Available | Positive | 4403864 - 4405174 | 49761.5 |
| hypothetical protein | B5F00_18370 | Not Available | Negative | 4405598 - 4406038 | 16638.6 |
| hypothetical protein | B5F00_18375 | Not Available | Negative | 4406299 - 4406751 | 17165.1 |
| hypothetical protein | B5F00_18380 | Not Available | Negative | 4406909 - 4407172 | 10521.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

