Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | B5F00_18225 | Not Available | Positive | 4369497 - 4371155 | 59841.5 |
| alpha-n-acetylglucosaminidase | B5F00_18230 | Not Available | Negative | 4371327 - 4373480 | 82429.0 |
| fumarate hydratase | B5F00_18235 | Not Available | Negative | 4373585 - 4375228 | 60429.6 |
| hydrolase | B5F00_18240 | Not Available | Positive | 4375368 - 4377275 | 73917.9 |
| duf4954 domain-containing protein | B5F00_18245 | Not Available | Negative | 4377419 - 4379404 | 74525.5 |
| gtpase hflx | B5F00_18250 | Not Available | Negative | 4379418 - 4380671 | 47673.5 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_18255 | Not Available | Negative | 4380763 - 4382349 | 58752.5 |
| susc/raga family tonb-linked outer membrane protein | B5F00_18260 | Not Available | Negative | 4382373 - 4385393 | 111949.0 |
| hypothetical protein | B5F00_18270 | Not Available | Positive | 4386564 - 4386812 | 9974.22 |
| hypothetical protein | B5F00_18275 | Not Available | Positive | 4386842 - 4387429 | 22338.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

