Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-mannosidase | B5F00_01565 | Not Available | Positive | 337475 - 339754 | 86159.9 |
| histidine acid phosphatase | B5F00_01570 | Not Available | Positive | 339761 - 341500 | 66774.8 |
| hybrid sensor histidine kinase/response regulator | B5F00_01575 | Not Available | Negative | 341749 - 345783 | 152532.0 |
| susc/raga family tonb-linked outer membrane protein | B5F00_01580 | Not Available | Positive | 345979 - 349110 | 117450.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_01585 | Not Available | Positive | 349123 - 350973 | 71110.1 |
| hypothetical protein | B5F00_01590 | Not Available | Positive | 350986 - 351660 | 24987.8 |
| xylanase | B5F00_01595 | Not Available | Positive | 351762 - 353324 | 59417.3 |
| laci family transcriptional regulator | B5F00_01600 | Not Available | Negative | 353405 - 354427 | 38256.6 |
| alkyl hydroperoxide reductase subunit f | B5F00_01605 | Not Available | Negative | 354567 - 356117 | 56039.5 |
| peroxiredoxin | B5F00_01610 | Not Available | Negative | 356130 - 356696 | 21053.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

