Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_17560 | Not Available | Positive | 4224139 - 4224480 | 12567.8 |
| Trna-gly | Not Available | Not Available | Positive | 4224486 - 4224558 | Not Available |
| cobalamin biosynthesis protein cobd | B5F00_17570 | Not Available | Negative | 4224594 - 4225526 | 34323.7 |
| threonine-phosphate decarboxylase | B5F00_17575 | Not Available | Negative | 4225508 - 4226518 | 38703.7 |
| cobyric acid synthase cobq | B5F00_17580 | Not Available | Negative | 4226511 - 4228001 | 55424.8 |
| atp--cob(i)alamin adenosyltransferase | B5F00_17585 | Not Available | Negative | 4228001 - 4228576 | 22265.0 |
| cobyrinic acid a,c-diamide synthase | B5F00_17590 | Not Available | Negative | 4228573 - 4229901 | 49200.8 |
| transporter | B5F00_17595 | Not Available | Positive | 4230190 - 4231878 | 60770.7 |
| ligand-gated channel protein | B5F00_17600 | Not Available | Positive | 4232290 - 4234467 | 81242.4 |
| ligand-gated channel protein | B5F00_17605 | Not Available | Positive | 4234840 - 4236900 | 78271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

