Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosine kinase | B5F00_01510 | Not Available | Negative | 318966 - 319952 | 35367.0 |
| Trna-asn | Not Available | Not Available | Positive | 320033 - 320106 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 320131 - 320204 | Not Available |
| alpha-n-acetylglucosaminidase | B5F00_01530 | Not Available | Positive | 324645 - 326909 | 87228.0 |
| duf5009 domain-containing protein | B5F00_01535 | Not Available | Positive | 326917 - 328035 | 41635.9 |
| susc/raga family tonb-linked outer membrane protein | B5F00_01540 | Not Available | Positive | 328111 - 331134 | 111912.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_01545 | Not Available | Positive | 331155 - 332795 | 61753.4 |
| glycerophosphodiester phosphodiesterase | B5F00_01550 | Not Available | Positive | 332869 - 333681 | 30925.9 |
| alpha-mannosidase | B5F00_01555 | Not Available | Positive | 333701 - 336034 | 88736.1 |
| glycoside hydrolase | B5F00_01560 | Not Available | Positive | 336060 - 337472 | 52012.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

