Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m16 | B5F00_16875 | Not Available | Negative | 4079328 - 4080548 | 46472.2 |
| rossman fold protein, tigr00730 family | B5F00_16880 | Not Available | Positive | 4080650 - 4081186 | 19870.1 |
| iron dicitrate transport regulator fecr | B5F00_16885 | Not Available | Positive | 4081204 - 4081806 | 21811.6 |
| carbohydrate kinase | B5F00_16890 | Not Available | Positive | 4081914 - 4082834 | 34510.2 |
| glycoside hydrolase | B5F00_16895 | Not Available | Positive | 4082874 - 4083911 | 38617.8 |
| aminopeptidase | B5F00_16900 | Not Available | Negative | 4083917 - 4086445 | 97535.4 |
| trna(5-methylaminomethyl-2-thiouridine)- methyltransferase | B5F00_16905 | Not Available | Negative | 4086449 - 4087576 | 42777.5 |
| ferredoxin | B5F00_16910 | Not Available | Negative | 4087576 - 4088355 | 28476.3 |
| arac family transcriptional regulator | B5F00_16915 | Not Available | Positive | 4088952 - 4089302 | 13459.0 |
| hypothetical protein | B5F00_16920 | Not Available | Negative | 4089303 - 4089456 | 5819.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

