Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | B5F00_16825 | Not Available | Positive | 4060706 - 4062130 | 55080.4 |
| signal peptidase i | B5F00_16830 | Not Available | Positive | 4062168 - 4063031 | 32870.7 |
| hypothetical protein | B5F00_16835 | Not Available | Positive | 4063031 - 4063687 | 25587.3 |
| d-mannonate oxidoreductase | B5F00_16840 | Not Available | Positive | 4063692 - 4064504 | 28669.7 |
| mannonate dehydratase | B5F00_16845 | Not Available | Positive | 4064544 - 4065719 | 44572.7 |
| susc/raga family tonb-linked outer membrane protein | B5F00_16850 | Not Available | Positive | 4065935 - 4069156 | 118822.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_16855 | Not Available | Positive | 4069170 - 4071023 | 69762.4 |
| sulfatase | B5F00_16860 | Not Available | Positive | 4071047 - 4072621 | 61147.8 |
| hybrid sensor histidine kinase/response regulator | B5F00_16865 | Not Available | Negative | 4072672 - 4076565 | 148801.0 |
| glycoside hydrolase family 95 | B5F00_16870 | Not Available | Negative | 4076773 - 4079229 | 92192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

