Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_15900 | Not Available | Negative | 3840120 - 3840686 | 21224.2 |
| rna polymerase | B5F00_15905 | Not Available | Negative | 3840677 - 3841147 | 18051.1 |
| galactose-1-epimerase | B5F00_15910 | Not Available | Negative | 3841333 - 3842466 | 42103.5 |
| hypothetical protein | B5F00_15915 | Not Available | Negative | 3842592 - 3844151 | 56869.9 |
| transglutaminase | B5F00_15920 | Not Available | Negative | 3844158 - 3846113 | 73871.5 |
| rna polymerase subunit sigma-70 | B5F00_15925 | Not Available | Positive | 3846254 - 3846757 | 18918.8 |
| sam-dependent methyltransferase | B5F00_15930 | Not Available | Positive | 3846768 - 3847556 | 31041.3 |
| metallophosphatase | B5F00_15935 | Not Available | Positive | 3847658 - 3848743 | 41064.3 |
| rlmi/rlmk family 23s rrna methyltransferase | B5F00_15940 | Not Available | Negative | 3849428 - 3850612 | 44491.2 |
| 3'-5' exonuclease | B5F00_15945 | Not Available | Negative | 3850602 - 3851252 | 24735.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

