Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | B5F00_11075 | Not Available | Positive | 2630983 - 2631573 | 22284.8 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | B5F00_11080 | Not Available | Positive | 2631615 - 2632334 | 26680.4 |
| imidazole glycerol phosphate synthase cyclase subunit | B5F00_11085 | Not Available | Positive | 2632344 - 2633099 | 27227.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | B5F00_11090 | Not Available | Positive | 2633265 - 2633876 | 23196.7 |
| phosphonate abc transporter atp-binding protein | B5F00_11095 | Not Available | Positive | 2633881 - 2634636 | 28403.2 |
| aspartate kinase | B5F00_11100 | Not Available | Positive | 2634744 - 2636063 | 49296.1 |
| diaminopimelate decarboxylase | B5F00_11105 | Not Available | Positive | 2636171 - 2637331 | 42735.3 |
| hypothetical protein | B5F00_11110 | Not Available | Negative | 2637396 - 2637902 | 19744.7 |
| glycosyl transferase family 2 | B5F00_11115 | Not Available | Positive | 2638107 - 2639264 | 44856.5 |
| antibiotic biosynthesis monooxygenase | B5F00_11120 | Not Available | Positive | 2639313 - 2639588 | 10402.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

