Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_10380 | Not Available | Positive | 2485102 - 2485689 | 21676.2 |
| hypothetical protein | B5F00_10385 | Not Available | Negative | 2485768 - 2486517 | 26787.2 |
| pyruvate formate lyase-activating protein | B5F00_10390 | Not Available | Negative | 2486619 - 2487347 | 27916.5 |
| formate c-acetyltransferase | B5F00_10395 | Not Available | Negative | 2487416 - 2489644 | 83956.1 |
| Trna-glu | Not Available | Not Available | Positive | 2489852 - 2489924 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2490182 - 2490271 | Not Available |
| glycosyltransferase | B5F00_10415 | Not Available | Negative | 2490415 - 2491509 | 42883.7 |
| pyridoxamine 5'-phosphate oxidase | B5F00_10420 | Not Available | Positive | 2491971 - 2492615 | 24861.9 |
| Trna-cys | Not Available | Not Available | Positive | 2492794 - 2492868 | Not Available |
| ferrous iron transport protein b | B5F00_10430 | Not Available | Negative | 2493180 - 2495648 | 92742.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

