Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_10230 | Not Available | Negative | 2451946 - 2452671 | 25982.1 |
| ll-diaminopimelate aminotransferase | B5F00_10235 | Not Available | Negative | 2452771 - 2454000 | 45798.8 |
| diaminopimelate epimerase | B5F00_10240 | Not Available | Negative | 2454047 - 2454889 | 30740.2 |
| molybdenum abc transporter atp-binding protein | B5F00_10245 | Not Available | Positive | 2455274 - 2456722 | 55014.9 |
| dihydrodipicolinate synthase family protein | B5F00_10250 | Not Available | Positive | 2456885 - 2457817 | 33960.4 |
| sodium:solute symporter | B5F00_10255 | Not Available | Positive | 2457831 - 2459264 | 52131.2 |
| nitronate monooxygenase | B5F00_10260 | Not Available | Negative | 2459562 - 2460512 | 34241.4 |
| c4-dicarboxylate abc transporter | B5F00_10265 | Not Available | Positive | 2460695 - 2461993 | 45850.3 |
| l-asparaginase 2 | B5F00_10270 | Not Available | Positive | 2462186 - 2463244 | 37861.8 |
| hypothetical protein | B5F00_10275 | Not Available | Positive | 2463332 - 2464501 | 44978.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

