Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease hsdr | B5F00_09930 | Not Available | Positive | 2380059 - 2381582 | 53867.6 |
| rna polymerase subunit sigma | B5F00_09935 | Not Available | Positive | 2382087 - 2382947 | 32805.3 |
| hypothetical protein | B5F00_09940 | Not Available | Positive | 2383169 - 2383570 | 15397.0 |
| clostripain | B5F00_09945 | Not Available | Positive | 2383581 - 2384843 | 47073.9 |
| hypothetical protein | B5F00_09950 | Not Available | Negative | 2384827 - 2385225 | 15082.7 |
| mg2+/co2+ transporter | B5F00_09955 | Not Available | Positive | 2385328 - 2386581 | 45673.9 |
| k+/h+ antiporter | B5F00_09960 | Not Available | Negative | 2386658 - 2388106 | 52852.7 |
| mate family efflux transporter | B5F00_09965 | Not Available | Negative | 2388103 - 2389455 | 49414.7 |
| phosphatase | B5F00_09970 | Not Available | Positive | 2389545 - 2390195 | 24626.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | B5F00_09975 | Not Available | Positive | 2390248 - 2391069 | 29522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

