Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | B5F00_00625 | Not Available | Negative | 141679 - 144975 | 122071.0 |
| anti-sigma factor | B5F00_00630 | Not Available | Negative | 145131 - 146129 | 38159.5 |
| rna polymerase subunit sigma-70 | B5F00_00635 | Not Available | Negative | 146190 - 146774 | 23201.0 |
| beta-xylosidase | B5F00_00640 | Not Available | Negative | 147067 - 148608 | 58481.5 |
| alpha-galactosidase | B5F00_00645 | Not Available | Negative | 148704 - 150860 | 82577.3 |
| arac family transcriptional regulator | B5F00_00650 | Not Available | Positive | 151048 - 151944 | 34684.5 |
| 9-o-acetylesterase | B5F00_00655 | Not Available | Negative | 151957 - 153927 | 73512.8 |
| beta-mannosidase | B5F00_00660 | Not Available | Negative | 154020 - 156914 | 109455.0 |
| galactose-1-epimerase | B5F00_00665 | Not Available | Negative | 156992 - 158014 | 38766.6 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_00670 | Not Available | Negative | 158104 - 159723 | 62013.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

