Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase thih | B5F00_09555 | Not Available | Positive | 2292448 - 2293578 | 43495.2 |
| molybdopterin biosynthesis protein | B5F00_09560 | Not Available | Positive | 2293616 - 2294347 | 26927.7 |
| glutathionylspermidine synthase | B5F00_09565 | Not Available | Negative | 2294461 - 2295585 | 43104.7 |
| hypothetical protein | B5F00_09570 | Not Available | Negative | 2295598 - 2295951 | 12903.2 |
| thiamine phosphate synthase | B5F00_09575 | Not Available | Positive | 2296170 - 2296778 | 22885.6 |
| ribose-phosphate pyrophosphokinase | B5F00_09580 | Not Available | Positive | 2296942 - 2297880 | 34166.4 |
| spermidine/putrescine abc transporter | B5F00_09585 | Not Available | Negative | 2298009 - 2299343 | 51312.7 |
| putrescine aminotransferase | B5F00_09590 | Not Available | Negative | 2299347 - 2300138 | 28715.2 |
| spermidine/putrescine abc transporter permease | B5F00_09595 | Not Available | Negative | 2300132 - 2300929 | 29552.0 |
| spermidine/putrescine abc transporter atp-binding protein | B5F00_09600 | Not Available | Negative | 2300942 - 2302330 | 51732.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

