Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class a beta-lactamase | B5F00_08440 | Not Available | Negative | 2038247 - 2039200 | 36101.6 |
| hypothetical protein | B5F00_08445 | Not Available | Negative | 2039224 - 2039721 | 18632.9 |
| glycoside hydrolase | B5F00_08450 | Not Available | Negative | 2039841 - 2041628 | 69837.1 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | B5F00_08455 | Not Available | Negative | 2041648 - 2043900 | 86508.0 |
| aspartate kinase | B5F00_08460 | Not Available | Positive | 2044261 - 2045607 | 50995.9 |
| chloramphenicol acetyltransferase | B5F00_08465 | Not Available | Positive | 2046017 - 2046652 | 24084.7 |
| had family hydrolase | B5F00_08470 | Not Available | Positive | 2046689 - 2047378 | 26303.0 |
| hypothetical protein | B5F00_08475 | Not Available | Negative | 2047524 - 2048225 | 25520.1 |
| potassium-transporting atpase subunit c | B5F00_08480 | Not Available | Negative | 2048496 - 2049065 | 20586.8 |
| potassium-transporting atpase subunit b | B5F00_08485 | Not Available | Negative | 2049079 - 2051112 | 72448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

