Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | B5F00_08185 | Not Available | Negative | 1965178 - 1965492 | 12228.6 |
| family 88 glycosyl hydrolase | B5F00_08190 | Not Available | Negative | 1965529 - 1966944 | 53232.8 |
| rhamnogalacturonan lyase | B5F00_08195 | Not Available | Negative | 1966957 - 1968864 | 70614.4 |
| polygalacturonase | B5F00_08200 | Not Available | Negative | 1968861 - 1970249 | 52158.9 |
| hypothetical protein | B5F00_08205 | Not Available | Negative | 1970313 - 1972664 | 89754.5 |
| hypothetical protein | B5F00_08210 | Not Available | Negative | 1972938 - 1975055 | 81145.0 |
| hypothetical protein | B5F00_08215 | Not Available | Negative | 1975111 - 1977351 | 84367.9 |
| pectate lyase | B5F00_08220 | Not Available | Negative | 1977360 - 1978868 | 57092.4 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_08225 | Not Available | Negative | 1978961 - 1980838 | 70202.5 |
| susc/raga family protein | B5F00_08230 | Not Available | Negative | 1980857 - 1984396 | 130862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

