Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_08135 | Not Available | Positive | 1950244 - 1952142 | 72602.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | B5F00_08140 | Not Available | Positive | 1952145 - 1953359 | 44989.5 |
| aspartate aminotransferase | B5F00_08145 | Not Available | Positive | 1953484 - 1954677 | 43151.6 |
| 4fe-4s ferredoxin | B5F00_08150 | Not Available | Negative | 1954856 - 1955023 | 5717.65 |
| beta-n-acetylglucosaminidase | B5F00_08155 | Not Available | Negative | 1955141 - 1958119 | 111343.0 |
| metallophosphatase | B5F00_08160 | Not Available | Negative | 1958165 - 1959007 | 31324.2 |
| 5'-nucleotidase | B5F00_08165 | Not Available | Negative | 1959019 - 1959798 | 27883.5 |
| 50s ribosomal protein l19 | B5F00_08170 | Not Available | Positive | 1959997 - 1960350 | 13130.2 |
| hypothetical protein | B5F00_08175 | Not Available | Positive | 1960504 - 1960722 | 7895.11 |
| hybrid sensor histidine kinase/response regulator | B5F00_08180 | Not Available | Negative | 1960810 - 1965096 | 162785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

