Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | B5F00_08085 | Not Available | Negative | 1935787 - 1937640 | 68967.7 |
| susc/raga family tonb-linked outer membrane protein | B5F00_08090 | Not Available | Negative | 1937669 - 1940749 | 114606.0 |
| glycoside hydrolase family 92 | B5F00_08095 | Not Available | Negative | 1940857 - 1942446 | 60205.7 |
| glycoside hydrolase family 97 | B5F00_08100 | Not Available | Negative | 1942459 - 1944342 | 72273.8 |
| rna polymerase subunit sigma-70 | B5F00_08105 | Not Available | Negative | 1944355 - 1944900 | 21061.2 |
| glucuronyl hydrolase | B5F00_08110 | Not Available | Negative | 1944925 - 1946151 | 46630.6 |
| transcriptional regulator | B5F00_08115 | Not Available | Negative | 1946385 - 1949189 | 106495.0 |
| Trna-met | Not Available | Not Available | Positive | 1949362 - 1949435 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1949494 - 1949570 | Not Available |
| hypothetical protein | B5F00_08130 | Not Available | Positive | 1949774 - 1950160 | 15243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

