Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase | B5F00_07980 | Not Available | Negative | 1896662 - 1898941 | 87059.1 |
| polygalacturonase | B5F00_07985 | Not Available | Negative | 1898981 - 1900528 | 55994.8 |
| hypothetical protein | B5F00_07990 | Not Available | Negative | 1900639 - 1902243 | 60755.8 |
| hypothetical protein | B5F00_07995 | Not Available | Negative | 1902381 - 1903289 | 35044.9 |
| endo-polygalacturonase | B5F00_08000 | Not Available | Negative | 1903480 - 1904913 | 53766.6 |
| alpha-l-arabinofuranosidase | B5F00_08010 | Not Available | Negative | 1906363 - 1908846 | 93026.2 |
| alpha-galactosidase | B5F00_08015 | Not Available | Negative | 1909081 - 1911297 | 84092.5 |
| hypothetical protein | B5F00_08020 | Not Available | Negative | 1911376 - 1912437 | 40719.0 |
| hypothetical protein | B5F00_08025 | Not Available | Negative | 1912513 - 1913328 | 30690.6 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_08030 | Not Available | Negative | 1913590 - 1915530 | 71829.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

