Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_07460 | Not Available | Positive | 1748749 - 1748940 | 7019.79 |
| hybrid sensor histidine kinase/response regulator | B5F00_07465 | Not Available | Positive | 1748962 - 1753014 | 154801.0 |
| hypothetical protein | B5F00_07470 | Not Available | Negative | 1753451 - 1753636 | 7399.24 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_07475 | Not Available | Negative | 1753641 - 1755575 | 71558.1 |
| susc/raga family tonb-linked outer membrane protein | B5F00_07480 | Not Available | Negative | 1755590 - 1758661 | 113079.0 |
| glycoside hydrolase 43 family protein | B5F00_07485 | Not Available | Negative | 1758703 - 1760439 | 64629.4 |
| alpha-n-arabinofuranosidase | B5F00_07490 | Not Available | Negative | 1760789 - 1761760 | 36816.1 |
| 1,4-beta-xylanase | B5F00_07495 | Not Available | Negative | 1761773 - 1762900 | 42140.6 |
| mfs transporter | B5F00_07500 | Not Available | Negative | 1762940 - 1764433 | 54486.8 |
| beta-glucanase | B5F00_07505 | Not Available | Negative | 1764761 - 1765552 | 30536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

