Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_07410 | Not Available | Positive | 1733591 - 1734577 | 38325.3 |
| rna polymerase subunit sigma-70 | B5F00_07415 | Not Available | Positive | 1734690 - 1735256 | 22672.8 |
| hypothetical protein | B5F00_07420 | Not Available | Positive | 1735312 - 1735719 | 15515.8 |
| anti-sigma factor | B5F00_07425 | Not Available | Positive | 1735746 - 1736636 | 33772.6 |
| tonb-dependent receptor | B5F00_07430 | Not Available | Positive | 1736644 - 1739319 | 102299.0 |
| hypothetical protein | B5F00_07435 | Not Available | Positive | 1739326 - 1740357 | 39217.1 |
| sialate o-acetylesterase | B5F00_07440 | Not Available | Negative | 1740389 - 1742326 | 72701.8 |
| alpha-glucuronidase | B5F00_07445 | Not Available | Negative | 1742354 - 1744399 | 77195.4 |
| glycosyhydrolase | B5F00_07450 | Not Available | Negative | 1744396 - 1746990 | 99279.6 |
| glycoside hydrolase | B5F00_07455 | Not Available | Negative | 1747003 - 1748586 | 60270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

