Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase | B5F00_06895 | Not Available | Negative | 1611828 - 1612916 | 40808.4 |
| phosphohydrolase | B5F00_06900 | Not Available | Positive | 1612982 - 1613683 | 27620.2 |
| hypothetical protein | B5F00_06905 | Not Available | Positive | 1613680 - 1614228 | 20506.6 |
| copper-translocating p-type atpase | B5F00_06910 | Not Available | Negative | 1614316 - 1616529 | 80041.1 |
| duf3298 domain-containing protein | B5F00_06915 | Not Available | Positive | 1616708 - 1617556 | 32109.1 |
| 16s rrna methyltransferase g | B5F00_06920 | Not Available | Positive | 1617577 - 1618203 | 23734.0 |
| mbl fold hydrolase | B5F00_06925 | Not Available | Positive | 1618224 - 1618862 | 23919.4 |
| glycine dehydrogenase (aminomethyl-transferring) | B5F00_06930 | Not Available | Positive | 1618898 - 1621747 | 105256.0 |
| peptidase s9 | B5F00_06935 | Not Available | Negative | 1622031 - 1624745 | 102759.0 |
| very short patch repair endonuclease | B5F00_06940 | Not Available | Negative | 1624778 - 1625308 | 21121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

