Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | B5F00_06445 | Not Available | Positive | 1513754 - 1514803 | 41420.9 |
| methylenetetrahydrofolate reductase | B5F00_06450 | Not Available | Negative | 1514896 - 1515849 | 35804.9 |
| tonb-dependent receptor | B5F00_06455 | Not Available | Negative | 1516146 - 1518449 | 85932.4 |
| hypothetical protein | B5F00_06460 | Not Available | Negative | 1518558 - 1518938 | 13857.4 |
| ligand-gated channel protein | B5F00_06465 | Not Available | Positive | 1519379 - 1521556 | 81076.3 |
| iron abc transporter substrate-binding protein | B5F00_06470 | Not Available | Positive | 1521570 - 1522727 | 43395.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | B5F00_06475 | Not Available | Negative | 1522836 - 1524596 | 64538.6 |
| arac family transcriptional regulator | B5F00_06480 | Not Available | Negative | 1524783 - 1525667 | 34022.0 |
| arac family transcriptional regulator | B5F00_06485 | Not Available | Negative | 1525699 - 1526607 | 35410.4 |
| flavodoxin | B5F00_06490 | Not Available | Positive | 1526932 - 1527468 | 19912.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

