Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_05815 | Not Available | Negative | 1362053 - 1362655 | 21649.9 |
| hypothetical protein | B5F00_05820 | Not Available | Negative | 1362652 - 1362933 | 10217.2 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_05825 | Not Available | Negative | 1363048 - 1364565 | 57916.4 |
| susc/raga family tonb-linked outer membrane protein | B5F00_05830 | Not Available | Negative | 1364586 - 1367714 | 116564.0 |
| luxr family transcriptional regulator | B5F00_05835 | Not Available | Negative | 1367938 - 1369563 | 63042.9 |
| ribonuclease hii | B5F00_05840 | Not Available | Positive | 1369665 - 1370270 | 22884.4 |
| l-fucose:h+ symporter permease | B5F00_05845 | Not Available | Negative | 1370413 - 1371726 | 48513.5 |
| l-fucose isomerase | B5F00_05850 | Not Available | Negative | 1371838 - 1373613 | 65624.0 |
| gntr family transcriptional regulator | B5F00_05855 | Not Available | Negative | 1373635 - 1374615 | 38083.7 |
| hypothetical protein | B5F00_05860 | Not Available | Negative | 1374791 - 1374997 | 7524.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

