Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | B5F00_05555 | Not Available | Positive | 1301247 - 1301594 | 13218.2 |
| d-alanyl-d-alanine dipeptidase | B5F00_05560 | Not Available | Positive | 1301618 - 1302283 | 25346.9 |
| sam-dependent methyltransferase | B5F00_05565 | Not Available | Positive | 1302287 - 1303471 | 43785.1 |
| dna-binding response regulator | B5F00_05570 | Not Available | Negative | 1303468 - 1304151 | 26125.7 |
| sensor histidine kinase | B5F00_05575 | Not Available | Negative | 1304156 - 1305694 | 59331.4 |
| tonb-dependent receptor | B5F00_05580 | Not Available | Positive | 1305746 - 1307818 | 79256.8 |
| fe-s metabolism protein sufe | B5F00_05585 | Not Available | Negative | 1307855 - 1308283 | 16112.5 |
| glutamine cyclotransferase | B5F00_05590 | Not Available | Negative | 1308295 - 1309299 | 37735.6 |
| fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase | B5F00_05595 | Not Available | Negative | 1309364 - 1311121 | 65126.4 |
| phosphate butyryltransferase | B5F00_05600 | Not Available | Positive | 1311204 - 1312112 | 33274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

