Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine repressor | B5F00_00230 | Not Available | Negative | 46107 - 46583 | 17501.2 |
| rhamnulokinase | B5F00_00235 | Not Available | Positive | 46891 - 48369 | 54799.7 |
| l-rhamnose isomerase | B5F00_00240 | Not Available | Positive | 48412 - 49665 | 47405.2 |
| rhamnose/proton symporter rhat | B5F00_00245 | Not Available | Positive | 49759 - 50778 | 35982.0 |
| rhamnulose-1-phosphate aldolase | B5F00_00250 | Not Available | Positive | 50864 - 51673 | 30228.7 |
| hypothetical protein | B5F00_00255 | Not Available | Positive | 52032 - 52529 | 18505.0 |
| sugar abc transporter | B5F00_00260 | Not Available | Negative | 52630 - 54144 | 55855.1 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_00265 | Not Available | Negative | 54312 - 55931 | 60033.4 |
| susc/raga family protein | B5F00_00270 | Not Available | Negative | 55943 - 59014 | 114354.0 |
| hybrid sensor histidine kinase/response regulator | B5F00_00275 | Not Available | Negative | 59155 - 63315 | 158119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

