Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1595 family transposase | B5F00_05035 | Not Available | Negative | 1202329 - 1203252 | 36197.1 |
| duf4923 domain-containing protein | B5F00_05040 | Not Available | Negative | 1203460 - 1204056 | 21617.3 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_05045 | Not Available | Negative | 1204301 - 1205920 | 60660.0 |
| susc/raga family tonb-linked outer membrane protein | B5F00_05050 | Not Available | Negative | 1205942 - 1208983 | 112631.0 |
| beta-glucanase | B5F00_05055 | Not Available | Negative | 1209052 - 1209828 | 30025.5 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | B5F00_05065 | Not Available | Negative | 1213048 - 1213899 | 31277.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | B5F00_05070 | Not Available | Positive | 1213980 - 1214453 | 18399.6 |
| endonuclease | B5F00_05075 | Not Available | Negative | 1214529 - 1215539 | 38208.8 |
| aminoacyl-histidine dipeptidase | B5F00_05080 | Not Available | Negative | 1215545 - 1217002 | 53162.8 |
| hypothetical protein | B5F00_05085 | Not Available | Positive | 1217224 - 1217451 | 8203.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

