Bacteroides clarus strain An189

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides clarus strain An189 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology and the presence of flagella. This strain has been identified in hosts, specifically Homo sapiens, indicating its association with human microbiota. Bacteroides species, including B. clarus, play a significant role in the human gut ecosystem, contributing to the digestion of complex carbohydrates and the maintenance of gut health. The anaerobic nature of B. clarus suggests that it thrives in low-oxygen environments, which are typical of the human gastrointestinal tract. The presence of flagella may facilitate its motility within this environment, allowing it to colonize and establish itself effectively. With a single replicon, B. clarus strain An189's genetic information is contained within one circular DNA molecule, which is a common characteristic among many bacterial species. The accession number for this strain is NFKE00000000.1, providing a unique identifier for its genomic data. In summary, Bacteroides clarus strain An189 exemplifies the diversity of the human gut microbiome, showcasing the complex interactions between microbial species and their human hosts. Its anaerobic lifestyle and motility adaptations highlight its significance in the gastrointestinal ecosystem, where it contributes to essential metabolic processes and overall gut health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides clarus
Strainstrain An189

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides clarus strain An189
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides clarus strain An189 An189_contig_35, whole genome

Gene Summary

Adenine Count

1154973 bp

Thymine Count

1115718 bp

Guanine Count

923355 bp

Cytosine Count

962412 bp

Genome Length

4156458 bp

Protein-coding Genes

3362 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-lysNot AvailableNot AvailablePositive4083132 - 4083207Not Available
flavodoxinB5F24_17110Not AvailableNegative4083363 - 408393520807.7
gamma-carboxymuconolactone decarboxylaseB5F24_17115Not AvailableNegative4084048 - 408487530505.1
hypothetical proteinB5F24_17120Not AvailableNegative4085005 - 40852237904.72
nad(p)-dependent oxidoreductaseB5F24_17125Not AvailableNegative4085344 - 408610527415.2
spermidine/putrescine abc transporter atp-binding proteinB5F24_17130Not AvailablePositive4086298 - 408769552238.5
spermidine/putrescine abc transporter permeaseB5F24_17135Not AvailablePositive4087703 - 408850329756.4
putrescine aminotransferaseB5F24_17140Not AvailablePositive4088500 - 408929128922.3
spermidine/putrescine abc transporterB5F24_17145Not AvailablePositive4089487 - 409081850980.2
n-acetylglucosamine-6-phosphate deacetylaseB5F24_17150Not AvailablePositive4090887 - 409205342910.5

Displaying genes 3361 – 3370 of 3422 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.