Parabacteroides johnsonii strain An42

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides johnsonii strain An42 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which may contribute to its motility. The strain has a single replicon, indicating a streamlined genomic organization that is typical of many bacterial species. The sequence accession for this strain is NFIJ00000000.1, which allows researchers to access its genetic information for further study. The presence of flagella in Parabacteroides johnsonii suggests a potential for movement in its environment, which could play a role in its colonization and survival strategies within various ecosystems, particularly in the gastrointestinal tract of hosts. As a member of the gut microbiota, P. johnsonii may contribute to key biological processes, including the digestion of complex carbohydrates and the modulation of the host's immune response. Understanding the traits of Parabacteroides johnsonii strain An42 provides insight into its ecological role and potential applications in health and disease. Its Gram-negative status and motility may influence its interactions with other microbial species and the host, highlighting the importance of studying this organism in the context of microbial ecology and symbiosis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides johnsonii
Strainstrain An42

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides johnsonii strain An42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatHuman faeces
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides johnsonii strain An42 An42_contig_72, whole genome

Gene Summary

Adenine Count

1224616 bp

Thymine Count

1222265 bp

Guanine Count

1005315 bp

Cytosine Count

996747 bp

Genome Length

4448943 bp

Protein-coding Genes

3489 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive1103864 - 1103948Not Available
Trna-leuNot AvailableNot AvailablePositive1103955 - 1104038Not Available
amino acid permeaseB5F96_04240Not AvailableNegative1104363 - 110601859821.8
oxidoreductaseB5F96_04245Not AvailableNegative1106084 - 110681827344.5
ligand-gated channel proteinB5F96_04250Not AvailablePositive1106908 - 110932591785.7
rna polymerase subunit sigma-70B5F96_04255Not AvailablePositive1109392 - 110993421735.2
anti-sigma factorB5F96_04260Not AvailablePositive1110257 - 111123737791.6
susc/raga family tonb-linked outer membrane proteinB5F96_04265Not AvailablePositive1111409 - 1114798126696.0
ragb/susd family nutrient uptake outer membrane proteinB5F96_04270Not AvailablePositive1114811 - 111660467845.4
hypothetical proteinB5F96_04275Not AvailablePositive1116706 - 111918692199.6

Displaying genes 841 – 850 of 3560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.