Parabacteroides johnsonii strain An42

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides johnsonii strain An42 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which may contribute to its motility. The strain has a single replicon, indicating a streamlined genomic organization that is typical of many bacterial species. The sequence accession for this strain is NFIJ00000000.1, which allows researchers to access its genetic information for further study. The presence of flagella in Parabacteroides johnsonii suggests a potential for movement in its environment, which could play a role in its colonization and survival strategies within various ecosystems, particularly in the gastrointestinal tract of hosts. As a member of the gut microbiota, P. johnsonii may contribute to key biological processes, including the digestion of complex carbohydrates and the modulation of the host's immune response. Understanding the traits of Parabacteroides johnsonii strain An42 provides insight into its ecological role and potential applications in health and disease. Its Gram-negative status and motility may influence its interactions with other microbial species and the host, highlighting the importance of studying this organism in the context of microbial ecology and symbiosis.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides johnsonii
Strainstrain An42

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides johnsonii strain An42
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatHuman faeces
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides johnsonii strain An42 An42_contig_72, whole genome

Gene Summary

Adenine Count

1224616 bp

Thymine Count

1222265 bp

Guanine Count

1005315 bp

Cytosine Count

996747 bp

Genome Length

4448943 bp

Protein-coding Genes

3489 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside kinaseB5F96_01570Not AvailablePositive412837 - 41450463888.5
eama family transporterB5F96_01575Not AvailablePositive414670 - 41554232185.1
histidine kinaseB5F96_01580Not AvailableNegative415520 - 41768282359.7
rna polymerase sigma-54 factorB5F96_01585Not AvailablePositive417881 - 41935056011.6
hypothetical proteinB5F96_01590Not AvailablePositive419363 - 41998322948.6
glycine cleavage system protein hB5F96_01595Not AvailablePositive420000 - 42038013965.3
5-(carboxyamino)imidazole ribonucleotide mutaseB5F96_01600Not AvailablePositive420377 - 42088317665.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseB5F96_01605Not AvailablePositive421008 - 42284668079.1
alpha-1,3-galactosidase bB5F96_01610Not AvailableNegative422988 - 42479667826.2
cysteine--trna ligaseB5F96_01615Not AvailablePositive424887 - 42636556054.6

Displaying genes 311 – 320 of 3560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.