Halorubrum sp. SD683

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. SD683 is a rod-shaped archaeon distinguished by the presence of flagella, which are likely involved in its motility. This organism possesses a single replicon, highlighting its genetic simplicity compared to other organisms with multiple replicons. The genome of Halorubrum sp. SD683 is cataloged under the accession number NEWJ00000000.1, indicating that it has been sequenced and made available for further scientific investigation. As a member of the Halorubrum genus, Halorubrum sp. SD683 is expected to thrive in extreme environments, particularly high-salinity conditions, typical of many halophilic microorganisms. The presence of flagella suggests that this archaeon may actively navigate its hypersaline habitat, which can provide ecological advantages in nutrient acquisition and competition with other microorganisms. Understanding the traits of Halorubrum sp. SD683 contributes to the broader knowledge of microbial life in extreme environments. The unique adaptations of such extremophiles are crucial for biotechnological applications, including bioremediation and the development of novel enzymes that function under extreme conditions. This organism exemplifies the ecological significance of halophiles in maintaining the balance within saline ecosystems and their potential utility in various industrial applications.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. SD683
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. SD683 NODE_137_length_1517_cov_3.41583, whole

Gene Summary

Adenine Count

490584 bp

Thymine Count

484712 bp

Guanine Count

1086567 bp

Cytosine Count

1084040 bp

Genome Length

3145993 bp

Protein-coding Genes

3032 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseB9G49_04430Not AvailablePositive859834 - 86079634515.8
hypothetical proteinB9G49_04435Not AvailablePositive860793 - 86134420256.2
hypothetical proteinB9G49_04440Not AvailableNegative861422 - 8616618114.11
quinol oxidaseB9G49_04445Not AvailableNegative861694 - 86222719305.9
phosphomethylpyrimidine synthaseB9G49_04455Not AvailableNegative863932 - 86536851631.8
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3B9G49_04460Not AvailablePositive865495 - 86722564666.1
peptidase s8 and s53 subtilisin kexin sedolisinB9G49_04465Not AvailablePositive867422 - 86875044848.4
hypothetical proteinB9G49_04470Not AvailablePositive868825 - 87101180579.2
hypothetical proteinB9G49_04475Not AvailablePositive871087 - 87147914395.4
amidophosphoribosyltransferaseB9G49_04480Not AvailablePositive871595 - 87309453561.1

Displaying genes 851 – 860 of 3087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.