Limnohabitans sp. 2KL-17 LimC-2KL-17-C111

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 2KL-17 LimC-2KL-17-C111 is a microbial organism characterized by its single replicon structure, indicating a streamlined genomic organization. The complete genome assembly of this strain is available under the accession number NESK00000000.1. As a member of the Limnohabitans genus, this strain is likely to be involved in aquatic ecosystems, contributing to nutrient cycling and possibly influencing the microbial community dynamics in freshwater environments. The single replicon may suggest a certain level of genomic efficiency, which can be advantageous for survival in fluctuating conditions typically found in limnic habitats. Ecologically, Limnohabitans sp. 2KL-17 could play a role in the degradation of organic matter and the transformation of nutrients, supporting the overall health of aquatic ecosystems. The presence of single-replicon bacteria, such as this strain, can indicate adaptability to specific ecological niches, allowing them to thrive in diverse environmental conditions. Understanding the traits of Limnohabitans sp. 2KL-17 LimC-2KL-17-C111 can contribute to broader insights into microbial ecology and the functioning of freshwater ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 2KL-17
StrainLimC-2KL-17-C111

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 2KL-17 LimC-2KL-17-C111, whole genome shotgun

Gene Summary

Adenine Count

734245 bp

Thymine Count

729012 bp

Guanine Count

1014905 bp

Cytosine Count

1022747 bp

Genome Length

3500909 bp

Protein-coding Genes

3220 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m23B9Z45_04960Not AvailablePositive1037087 - 103855353035.6
anhydro-n-acetylmuramic acid kinaseB9Z45_04965Not AvailablePositive1038674 - 103981040436.2
iron-sulfur cluster insertion protein erpaB9Z45_04970Not AvailableNegative1039845 - 104021012926.1
30s ribosomal protein s9B9Z45_04975Not AvailableNegative1040374 - 104076614386.5
50s ribosomal protein l13B9Z45_04980Not AvailableNegative1040778 - 104120915721.3
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjB9Z45_04985Not AvailablePositive1041406 - 104229332626.3
1,2-phenylacetyl-coa epoxidase subunit aB9Z45_04990Not AvailablePositive1042424 - 104345538431.7
1,2-phenylacetyl-coa epoxidase subunit bB9Z45_04995Not AvailablePositive1043452 - 104376011551.5
phenylacetate-coa oxygenase subunit paaiB9Z45_05000Not AvailablePositive1043769 - 104455128966.1
phenylacetate-coa oxygenase subunit paajB9Z45_05005Not AvailablePositive1044561 - 104510019376.1

Displaying genes 981 – 990 of 3270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.