Limnohabitans sp. B9-3 LimA-B9-3-C23

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. B9-3, specifically the strain LimA-B9-3-C23, is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in aquatic environments. The genomic data for this strain is recorded under the accession NESI00000000.1, providing a reference point for further studies and comparisons within the genus. As a member of the Limnohabitans genus, Limnohabitans sp. B9-3 is likely adapted to freshwater ecosystems, where it may play a role in nutrient cycling and the degradation of organic matter. The single-replicon feature suggests a potential efficiency in resource utilization, allowing it to thrive in fluctuating environmental conditions often found in limnic habitats. The ecological implications of Limnohabitans sp. B9-3 highlight its importance in maintaining the balance of microbial communities in freshwater systems. Its ability to adapt and respond to varying environmental conditions may position it as a key player in the microbiome dynamics of these ecosystems. Understanding its genomic characteristics and ecological roles could contribute to insights into microbial community structure and function in freshwater environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. B9-3
StrainLimA-B9-3-C23

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. B9-3 LimA-B9-3-C23, whole genome shotgun

Gene Summary

Adenine Count

742841 bp

Thymine Count

734627 bp

Guanine Count

958078 bp

Cytosine Count

964447 bp

Genome Length

3399993 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose 5-phosphate isomerase aB9Z42_04155Not AvailablePositive838352 - 83905024367.5
short-chain dehydrogenaseB9Z42_04160Not AvailablePositive839047 - 83975124208.2
lysine transporter lyseB9Z42_04165Not AvailableNegative839759 - 84037021762.2
oligopeptidase aB9Z42_04170Not AvailableNegative840376 - 84251779141.7
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolaseB9Z42_04175Not AvailableNegative842531 - 84339730397.2
dna-binding response regulatorB9Z42_04180Not AvailableNegative843495 - 84412122842.7
pas domain-containing sensor histidine kinaseB9Z42_04185Not AvailableNegative844144 - 84665494322.6
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeB9Z42_04190Not AvailablePositive846822 - 849533101189.0
dihydrolipoyllysine-residue acetyltransferaseB9Z42_04195Not AvailablePositive849549 - 85121056844.0
dihydrolipoyl dehydrogenaseB9Z42_04200Not AvailablePositive851220 - 85310364367.0

Displaying genes 831 – 840 of 3195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.