Limnohabitans sp. B9-3 LimA-B9-3-C23

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. B9-3, specifically the strain LimA-B9-3-C23, is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in aquatic environments. The genomic data for this strain is recorded under the accession NESI00000000.1, providing a reference point for further studies and comparisons within the genus. As a member of the Limnohabitans genus, Limnohabitans sp. B9-3 is likely adapted to freshwater ecosystems, where it may play a role in nutrient cycling and the degradation of organic matter. The single-replicon feature suggests a potential efficiency in resource utilization, allowing it to thrive in fluctuating environmental conditions often found in limnic habitats. The ecological implications of Limnohabitans sp. B9-3 highlight its importance in maintaining the balance of microbial communities in freshwater systems. Its ability to adapt and respond to varying environmental conditions may position it as a key player in the microbiome dynamics of these ecosystems. Understanding its genomic characteristics and ecological roles could contribute to insights into microbial community structure and function in freshwater environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. B9-3
StrainLimA-B9-3-C23

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. B9-3 LimA-B9-3-C23, whole genome shotgun

Gene Summary

Adenine Count

742841 bp

Thymine Count

734627 bp

Guanine Count

958078 bp

Cytosine Count

964447 bp

Genome Length

3399993 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorB9Z42_03550Not AvailablePositive713911 - 71457624774.4
c4-dicarboxylate abc transporter permeaseB9Z42_03555Not AvailablePositive714683 - 71522220208.3
l-dehydroascorbate transporter large permease subunitB9Z42_03560Not AvailablePositive715241 - 71651844960.4
abc transporter substrate-binding proteinB9Z42_03565Not AvailablePositive716607 - 71762636959.0
type ii 3-dehydroquinate dehydrataseB9Z42_03570Not AvailablePositive717698 - 71813816237.5
shikimate dehydrogenaseB9Z42_03575Not AvailablePositive718145 - 71899629888.3
4-hydroxyphenylpyruvate dioxygenaseB9Z42_03580Not AvailablePositive719029 - 71992232940.9
xylose isomeraseB9Z42_03585Not AvailablePositive719934 - 72082732622.1
aldo/keto reductaseB9Z42_03590Not AvailablePositive720824 - 72182535846.1
rna polymerase sigma factor rpodB9Z42_03595Not AvailableNegative721929 - 72421185020.5

Displaying genes 711 – 720 of 3195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.