Limnohabitans sp. B9-3 LimA-B9-3-C23

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. B9-3, specifically the strain LimA-B9-3-C23, is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in aquatic environments. The genomic data for this strain is recorded under the accession NESI00000000.1, providing a reference point for further studies and comparisons within the genus. As a member of the Limnohabitans genus, Limnohabitans sp. B9-3 is likely adapted to freshwater ecosystems, where it may play a role in nutrient cycling and the degradation of organic matter. The single-replicon feature suggests a potential efficiency in resource utilization, allowing it to thrive in fluctuating environmental conditions often found in limnic habitats. The ecological implications of Limnohabitans sp. B9-3 highlight its importance in maintaining the balance of microbial communities in freshwater systems. Its ability to adapt and respond to varying environmental conditions may position it as a key player in the microbiome dynamics of these ecosystems. Understanding its genomic characteristics and ecological roles could contribute to insights into microbial community structure and function in freshwater environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. B9-3
StrainLimA-B9-3-C23

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. B9-3 LimA-B9-3-C23, whole genome shotgun

Gene Summary

Adenine Count

742841 bp

Thymine Count

734627 bp

Guanine Count

958078 bp

Cytosine Count

964447 bp

Genome Length

3399993 bp

Protein-coding Genes

3145 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-disulfide reductaseB9Z42_01200Not AvailablePositive243684 - 24464033796.2
50s ribosomal protein l28B9Z42_01205Not AvailablePositive244768 - 2450018797.62
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive244805 - 244901Not Available
50s ribosomal protein l33B9Z42_01210Not AvailablePositive245027 - 2451976460.02
acyl-coa desaturaseB9Z42_01215Not AvailableNegative245362 - 24657345782.4
sam-dependent methyltransferaseB9Z42_01220Not AvailableNegative246629 - 24797249350.2
hypothetical proteinB9Z42_01225Not AvailablePositive247993 - 2482359084.85
acyl-coa dehydrogenaseB9Z42_01230Not AvailableNegative248242 - 24935739814.9
pimeloyl-coa dehydrogenase large subunitB9Z42_01235Not AvailableNegative249373 - 25059344921.7
phosphoribosylglycinamide formyltransferaseB9Z42_01240Not AvailablePositive250701 - 25129121071.5

Displaying genes 241 – 250 of 3195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.