Limnohabitans sp. G3-2 LimC-G3-2-C25

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. G3-2 LimC-G3-2-C25 is characterized by having a single replicon, indicating a streamlined genomic architecture that can be advantageous for its adaptability and efficiency in nutrient utilization. The genomic data for this organism is accessible under the accession number NESG00000000.1, which provides a basis for further analysis and comparison with other related species. This bacterium is part of the Limnohabitans genus, which is known to inhabit freshwater environments. The ecological role of Limnohabitans sp. G3-2 LimC-G3-2-C25 may involve participation in biogeochemical cycles, particularly in the cycling of organic matter and nutrients within its aquatic habitat. The single replicon structure may suggest a potential for rapid growth in response to environmental changes, which is a common trait among freshwater microorganisms that must adapt to fluctuating conditions. Thus, the specific genomic traits of Limnohabitans sp. G3-2 LimC-G3-2-C25, including its singular replicon and genomic accessibility, provide valuable insights into its ecological role in freshwater ecosystems, emphasizing the importance of microbial diversity in nutrient cycling and ecosystem health. Further research could elaborate on the functional implications of its genomic characteristics within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. G3-2
StrainLimC-G3-2-C25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. G3-2 LimC-G3-2-C25, whole genome shotgun

Gene Summary

Adenine Count

644999 bp

Thymine Count

650024 bp

Guanine Count

976247 bp

Cytosine Count

977215 bp

Genome Length

3248485 bp

Protein-coding Genes

2981 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-tyrosyl-trna(tyr) deacylaseB9Z31_10065Not AvailableNegative2128102 - 212854515461.0
cation diffusion facilitator family transporterB9Z31_10070Not AvailableNegative2128542 - 212946833475.9
tyrosine--trna ligaseB9Z31_10075Not AvailableNegative2129518 - 213075044840.3
peptidase m23B9Z31_10080Not AvailablePositive2130894 - 213236052890.3
anhydro-n-acetylmuramic acid kinaseB9Z31_10085Not AvailablePositive2132457 - 213359639986.7
iron-sulfur cluster insertion protein erpaB9Z31_10090Not AvailableNegative2133630 - 213399512910.1
30s ribosomal protein s9B9Z31_10095Not AvailableNegative2134184 - 213457614404.4
50s ribosomal protein l13B9Z31_10100Not AvailableNegative2134588 - 213501915694.2
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjB9Z31_10105Not AvailablePositive2135217 - 213610432582.2
1,2-phenylacetyl-coa epoxidase subunit aB9Z31_10110Not AvailablePositive2136234 - 213726538368.5

Displaying genes 1991 – 2000 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.