Limnohabitans sp. G3-2 LimC-G3-2-C25

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. G3-2 LimC-G3-2-C25 is characterized by having a single replicon, indicating a streamlined genomic architecture that can be advantageous for its adaptability and efficiency in nutrient utilization. The genomic data for this organism is accessible under the accession number NESG00000000.1, which provides a basis for further analysis and comparison with other related species. This bacterium is part of the Limnohabitans genus, which is known to inhabit freshwater environments. The ecological role of Limnohabitans sp. G3-2 LimC-G3-2-C25 may involve participation in biogeochemical cycles, particularly in the cycling of organic matter and nutrients within its aquatic habitat. The single replicon structure may suggest a potential for rapid growth in response to environmental changes, which is a common trait among freshwater microorganisms that must adapt to fluctuating conditions. Thus, the specific genomic traits of Limnohabitans sp. G3-2 LimC-G3-2-C25, including its singular replicon and genomic accessibility, provide valuable insights into its ecological role in freshwater ecosystems, emphasizing the importance of microbial diversity in nutrient cycling and ecosystem health. Further research could elaborate on the functional implications of its genomic characteristics within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. G3-2
StrainLimC-G3-2-C25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. G3-2 LimC-G3-2-C25, whole genome shotgun

Gene Summary

Adenine Count

644999 bp

Thymine Count

650024 bp

Guanine Count

976247 bp

Cytosine Count

977215 bp

Genome Length

3248485 bp

Protein-coding Genes

2981 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-idonate 5-dehydrogenaseB9Z31_00735Not AvailablePositive150440 - 15148036635.4
3-oxoacyl-acp reductaseB9Z31_00740Not AvailablePositive151520 - 15226926333.8
phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating)B9Z31_00745Not AvailablePositive152279 - 15368850286.4
dehydrataseB9Z31_00750Not AvailableNegative153790 - 15498344029.8
abc transporter substrate-binding proteinB9Z31_00755Not AvailableNegative155071 - 15607836672.2
l-dehydroascorbate transporter large permease subunitB9Z31_00760Not AvailableNegative156118 - 15741645578.3
trap transporter permease dctqB9Z31_00765Not AvailableNegative157413 - 15792819106.9
gntr family transcriptional regulatorB9Z31_00770Not AvailableNegative157978 - 15879929903.6
dihydroxy-acid dehydrataseB9Z31_00775Not AvailablePositive158994 - 16074263000.1
nad-dependent epimeraseB9Z31_00780Not AvailablePositive160759 - 16176335358.6

Displaying genes 141 – 150 of 3031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.