Limnohabitans sp. Hippo3 LimC-Hippo3-C31

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Hippo3 LimC-Hippo3-C31 is characterized by having a single replicon, which is indicative of its genomic organization. The genome of this strain is accessible under the accession number NESF00000000.1, providing a resource for further genetic and functional studies. The single replicon structure can suggest a streamlined genomic architecture, which may be advantageous for adaptation to specific ecological niches. This trait is often observed in aquatic microorganisms, allowing for efficient replication and regulation of essential genes in fluctuating environments. Understanding the genomic features of Limnohabitans sp. Hippo3 LimC-Hippo3-C31 contributes to our knowledge of microbial diversity in freshwater ecosystems. Given that Limnohabitans species are often associated with water bodies, their ecological roles could include biogeochemical cycling and interactions within microbial communities. The streamlined genomic structure might also facilitate rapid responses to environmental changes, highlighting the adaptability of this strain in freshwater habitats. Overall, the genomic insights into Limnohabitans sp. Hippo3 LimC-Hippo3-C31 underscore its potential significance in the context of freshwater microbiology, where single replicon organisms may serve as key players in maintaining ecosystem stability and functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Hippo3
StrainLimC-Hippo3-C31

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Hippo3 LimC-Hippo3-C31, whole genome shotgun

Gene Summary

Adenine Count

585815 bp

Thymine Count

578112 bp

Guanine Count

913355 bp

Cytosine Count

913399 bp

Genome Length

2990681 bp

Protein-coding Genes

2805 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidaseB9Z34_02475Not AvailablePositive532558 - 53391347402.0
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseB9Z34_02480Not AvailablePositive533918 - 53540851155.8
ribonuclease rB9Z34_02485Not AvailableNegative535444 - 53772084513.5
Trna-leuNot AvailableNot AvailablePositive537739 - 537823Not Available
30s ribosomal protein s12 methylthiotransferase rimoB9Z34_02495Not AvailableNegative537980 - 53937750893.7
polyhydroxyalkanoate synthesis repressor pharB9Z34_02500Not AvailableNegative539435 - 54007023396.4
riboflavin synthaseB9Z34_02505Not AvailablePositive540196 - 54083422604.0
3,4-dihydroxy-2-butanone-4-phosphate synthaseB9Z34_02510Not AvailablePositive540831 - 54195840450.7
6,7-dimethyl-8-ribityllumazine synthaseB9Z34_02515Not AvailablePositive541961 - 54247018304.7
n utilization substance protein bB9Z34_02520Not AvailablePositive542467 - 54298818898.3

Displaying genes 501 – 510 of 2856 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.